Actually, I looked at the wrong post to check what model you have, and saw Kevlar's "04 GT Wagon".
You have the same model as me, so yes, it is controlled by the BIU.
Are the "door open" indicators working on your dash?
If yes, then all the door switches are ok, and it's probably the BIU as I suggested. That's not easy to check direclty, it's buried deep inside the dash.
Here's the relevant pages from the MY05 service manual. The most relevant part is in the red box:

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